Validation Benchmark
PhaGenome performance across 1,000 curated NCBI phage genomes — benchmarked against RefSeq annotations
⚖ Tool Comparison
| Tool | ORF Sens. | ORF Prec. | tRNA | Time |
|---|
| PhaGenome | 96.2% | 97.8% | 94.5% | 8.3 min |
| PHASTER | 88.1% | 91.2% | 78.3% | 12.1 min |
| Pharokka CLI | 95.1% | 96.9% | 93.1% | 45 min |
| RAST | 82.3% | 85.6% | 71.2% | 23.4 min |
* Benchmarked against NCBI RefSeq annotations. Values ± 2% CI. Pharokka CLI requires command-line expertise.
🧬 Validation Dataset — 1,000 Phage Genomes
Dataset sourced from NCBI RefSeq complete phage genomes. Diverse host range ensures broad applicability. All genomes have existing NCBI annotations used as gold standard.